Function reference • ctxR

All functions

bioactivity_api_server: Bioactivity API Server url

chemical_api_server: Chemical API Server url

chemical_contains(): Chemical contains

chemical_contains_batch(): Chemical contains batch search

chemical_equal(): Chemical equal

chemical_equal_batch(): Chemical equal batch search

chemical_starts_with(): Chemical starts with

chemical_starts_with_batch(): Chemical starts with batch search

create_data.table_chemical_details(): Create chemical details data.table helper function

set_ctxR_option() has_ctxR_options() has_ctxR_option(): ctxR Options

exposure_api_server: Exposure API Server url

get_all_assays(): Retrieve all assays

get_all_public_chemical_lists(): Get all public chemical lists

get_annotation_by_aeid(): Retrieve annotations for AEID

get_annotation_by_aeid_batch(): Retrieve annotations for AEID batch

get_bioactivity_details(): Retrieve bioactivity data from DTXSID, AEID, SPID, or m4id

get_bioactivity_details_batch(): Retrieve bioactivity data from DTXSID or AEID batch

get_bioactivity_endpoint_status(): Bioactivity API Endpoint status

get_bioactivity_summary(): Retrieve bioactivity summary for AEID

get_bioactivity_summary_batch(): Retrieve bioactivity summary data from AEID batch

get_cancer_hazard(): Get cancer hazard

get_cancer_hazard_batch(): Get cancer hazard batch

get_cancer_hazard_batch_old(): Get cancer hazard batch

get_chemicals_in_list(): Get chemicals in a given chemical list

get_chemicals_in_list_batch(): Get chemicals in a given chemical list batch

get_chemical_by_property_range(): Get chemicals by property and its value range

get_chemical_by_property_range_batch(): Retrieve chemicals by property and value range in batch search

get_chemical_details(): Retrieve chemical details from DTXSID of DTXCID

get_chemical_details_batch(): Retrieve chemical details from DTXSID of DTXCID in batch search

get_chemical_endpoint_status(): Chemical API Endpoint status

get_chemical_image(): Get image file by DTXSID or DTXCID

get_chemical_image_batch(): Get image file by DTXSID or DTXCID batch

get_chemical_lists_by_type(): Get chemical lists by type

get_chemical_lists_by_type_batch(): Get chemical lists by type batch search

get_chemical_mol(): Get mol file by DTXSID or DTXCID

get_chemical_mol_batch(): Get mol file by DTXSID or DTXCID batch

get_chemical_mrv(): Get mrv file by DTXSID or DTXCID

get_chemical_mrv_batch(): Ger mrv file by DTXSID or DTXCID batch

get_chemical_synonym(): Get chemical synonym

get_chemical_synonym_batch(): Get chemical synonym batch

get_chem_info(): Retrieve chemical information

get_chem_info_batch(): Retrieve chemical information in batch search

get_chem_info_batch_old(): Retrieve chemical information in batch search

get_ecotox_hazard_by_dtxsid(): Get ecotox hazard data by DTXSID

get_ecotox_hazard_by_dtxsid_batch(): Get ecotox hazard data by DTXSID batch

get_ecotox_hazard_by_dtxsid_batch_old(): Get ecotox hazard data by DTXSID batch

get_exposure_endpoint_status(): Exposure API Endpoint status

get_exposure_functional_use(): Retrieve exposure related functional use data

get_exposure_functional_use_batch(): Retrieve exposure related functional use data batch

get_exposure_functional_use_category(): Retrieve functional use categories

get_exposure_functional_use_probability(): Retrieve probability of exposure for functional use category

get_exposure_functional_use_probability_batch(): Retrieve exposure functional use probability data batch

get_exposure_list_presence_tags(): Retrieve list presence tags

get_exposure_list_presence_tags_by_dtxsid(): Retrieve document data and list presence tags for a chemical

get_exposure_list_presence_tags_by_dtxsid_batch(): Retrieve document data and list presence tags for chemicals batch

get_exposure_product_data(): Retrieve product data for exposure purposes

get_exposure_product_data_batch(): Retrieve product data for exposure purposes batch

get_exposure_product_data_puc(): Retrieve product use categories related to exposure

get_fate_by_dtxsid(): Get fate by DTXSID

get_fate_by_dtxsid_batch(): Retrieve chemical fate data in batch search

get_fate_by_dtxsid_batch_old(): Retrieve chemical fate data in batch search

get_genetox_details(): Get genetox details

get_genetox_details_batch(): Get genetox details batch

get_genetox_details_batch_old(): Get genetox details batch

get_genetox_summary(): Get genetox summary

get_genetox_summary_batch(): Get genetox summary batch

get_genetox_summary_batch_old(): Get genetox summary batch

get_hazard_by_dtxsid(): Get hazard data by DTXSID

get_hazard_by_dtxsid_batch(): Get hazard data by DTXSID batch

get_hazard_by_dtxsid_batch_old(): Get hazard data by DTXSID batch

get_hazard_endpoint_status(): Hazard API Endpoint status

get_human_hazard_by_dtxsid(): Get human hazard data by DTXSID

get_human_hazard_by_dtxsid_batch(): Get human hazard data by DTXSID batch

get_human_hazard_by_dtxsid_batch_old(): Get human hazard data by DTXSID batch

get_inchi(): Get InChI

get_inchikey(): Get InChIKey

get_lists_containing_chemical(): Get chemical lists containing given chemical

get_lists_containing_chemical_batch(): Get chemical lists containing given chemical batch

get_msready_by_dtxcid(): Get msready by DTXCID

get_msready_by_dtxcid_batch(): Get msready by DTXCID batch search

get_msready_by_formula(): Get msready by formula

get_msready_by_formula_batch(): Get msready by formula batch search

get_msready_by_mass(): Get msready by mass

get_msready_by_mass_batch(): Get ms ready by mass batch search

get_msready_by_mass_with_error_batch(): Get msready by mass and error offset

get_public_chemical_list_by_name(): Get chemical list by name

get_public_chemical_list_by_name_batch(): Get chemical list by name batch

get_skin_eye_hazard(): Get skin and eye hazard

get_skin_eye_hazard_batch(): Get skin and eye hazard batch

get_skin_eye_hazard_batch_old(): Get skin and eye hazard batch

get_smiles(): Get Smiles

hazard_api_server: Hazard API Server url

prepare_word(): Prepare url helper function

showing_key() ctxR_show_api_key() ctxR_hide_api_key() register_ctx_api_key() print(<ctx_credentials>) ctx_key() has_ctx_key(): Register CTX API Key for ctxR